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头条军事

头条军事ampliconDIVider
ampliconDIVider identifies deletion and insertion variants (DIVs) in DNA amplicons.

头条军事bam2mpg
A Bayesian genotype caller for NextGen sequencing data.

BuddySuite
A collection of four independent, yet interrelated, command line programs that facilitate each step in the workflow of sequence discovery, curation, alignment, and phylogenetic reconstruction.

Complementary Pairs Stability Selection for Genome-Wide Association Studies (ComPaSS-GWAS)
An ad-hoc alternative to replication that can reduce type I errors for GWA studies when appropriate replication data are not available.

Conserved Domain-based Prediction (CDPred)
A computational algorithm that is designed to theoretically calculate the effect of substituting an amino acid relative to the reference sequence within functional modules - the protein domains.

GeIST
A set of files and scripts used to detect and annotate MLV integration sites.

GeneLink
A data management system designed to facilitate genetic studies of complex traits.

Genometric Analysis Simulation Program (G.A.S.P.)
A software tool that can generate samples of family data based on user specified genetic models.

r2VIM
A new recurrency-based variable selection method in random forests for genome-wide genetic association studies.

ROMPrev
A software suite for quantitative trait and locus-specific heritability estimation and association testing using the revised ROMP method.

Shimmer
A tool for the detection of genetic alterations in tumors from Next Generation sequence data.

SKIPPY
A tool for scoring exonic variants for features associated with exon skipping and ectopic splice site creation.

SOOP
A tool for the design and selection of overgo probes optimized for high-throughput comparative mapping.

SubmiRine
A software package for predicting microRNA target site variants (miR-TSVs) from clinical genomic data sets.

Tiled Regression Analysis
A software framework for selecting a set of genetic predictors which jointly and independently explain trait variation with an additive regression model.

trieFinder
A tool that rapidly maps sequence tags to RefSeq, UniGene, and genomic sequences, providing output amenable to both transcript quantification and the detection of novel transcripts.

Var-MD
An annotation and analysis tool for next-generation sequencing variants in rare diseases and small pedigrees.

VarSifter
VarSifter is a graphical java program designed to display, sort, filter, and generally sift variation data from massively parallel sequencing experiments.

  • Available Resources

    头条军事ampliconDIVider
    ampliconDIVider identifies deletion and insertion variants (DIVs) in DNA amplicons.

    头条军事bam2mpg
    A Bayesian genotype caller for NextGen sequencing data.

    BuddySuite
    A collection of four independent, yet interrelated, command line programs that facilitate each step in the workflow of sequence discovery, curation, alignment, and phylogenetic reconstruction.

    Complementary Pairs Stability Selection for Genome-Wide Association Studies (ComPaSS-GWAS)
    An ad-hoc alternative to replication that can reduce type I errors for GWA studies when appropriate replication data are not available.

    Conserved Domain-based Prediction (CDPred)
    A computational algorithm that is designed to theoretically calculate the effect of substituting an amino acid relative to the reference sequence within functional modules - the protein domains.

    GeIST
    A set of files and scripts used to detect and annotate MLV integration sites.

    GeneLink
    A data management system designed to facilitate genetic studies of complex traits.

    Genometric Analysis Simulation Program (G.A.S.P.)
    A software tool that can generate samples of family data based on user specified genetic models.

    r2VIM
    A new recurrency-based variable selection method in random forests for genome-wide genetic association studies.

    ROMPrev
    A software suite for quantitative trait and locus-specific heritability estimation and association testing using the revised ROMP method.

    Shimmer
    A tool for the detection of genetic alterations in tumors from Next Generation sequence data.

    SKIPPY
    A tool for scoring exonic variants for features associated with exon skipping and ectopic splice site creation.

    SOOP
    A tool for the design and selection of overgo probes optimized for high-throughput comparative mapping.

    SubmiRine
    A software package for predicting microRNA target site variants (miR-TSVs) from clinical genomic data sets.

    Tiled Regression Analysis
    A software framework for selecting a set of genetic predictors which jointly and independently explain trait variation with an additive regression model.

    trieFinder
    A tool that rapidly maps sequence tags to RefSeq, UniGene, and genomic sequences, providing output amenable to both transcript quantification and the detection of novel transcripts.

    Var-MD
    An annotation and analysis tool for next-generation sequencing variants in rare diseases and small pedigrees.

    VarSifter
    VarSifter is a graphical java program designed to display, sort, filter, and generally sift variation data from massively parallel sequencing experiments.

Last updated: October 11, 2019